PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50978.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 382aa    MW: 41797.6 Da    PI: 7.0568
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.1e-10225273355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  PHT50978.1 225 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 273
                 58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MGSKENGSFN CPSTGMNRAD SMPNVDPYSG FGWDPLLSMN QKRGFKGSSV VGHNEFANLP  60
YQSSHFAHYP SDSNLAEMVP KIPPFGNESF SELVNAFPLQ EQLRGANCYA NFVKNRGIAT  120
EGECQISGEG AVEVSPNGKR KMSENHSLSN ANKNVEGELQ KAPSRDSSDC SKEQDGGKRH  180
KTDQNVSPNL RSKQAGKQVK DDSDGGEPPK DNYVHVRAKR GQATNSHSLA ERVRRERISE  240
RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NFDIDRILSK  300
EILHQQTSNA ALLGLGPGLT SSLPFPGISH GSFTGIPATT PPFHPLPQNA WDNELQSLLQ  360
MGFDSTSSLN NMGPNGRSKL DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-64bHLH family protein