PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48970.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 543aa MW: 60721.9 Da PI: 4.4284

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.2	3.1e-53	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ++pGfrFhPtdeelv++yLk+kv gk+l++ ++i+e+diykvePwdLp +++k+++ ewyfFs d+k+ +g ++nrat++gyWk+tgkd++v++ k+ PHT48970.1 10 MAPGFRFHPTDEELVSYYLKRKVCGKPLRF-DAISEIDIYKVEPWDLPgmSRLKTRDLEWYFFSVLDRKHGNGAKTNRATERGYWKTTGKDRAVHH-KS 106 579***********************99.99***********6347788888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLvf++grapkg++t+Wvmhey+l PHT48970.1 107 KVVGMKKTLVFHSGRAPKGQRTNWVMHEYKL 137 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEPKGLRKLM APGFRFHPTD EELVSYYLKR KVCGKPLRFD AISEIDIYKV EPWDLPGMSR 60 LKTRDLEWYF FSVLDRKHGN GAKTNRATER GYWKTTGKDR AVHHKSKVVG MKKTLVFHSG 120 RAPKGQRTNW VMHEYKLIDE ELVKAGIVQD ALVLCRVFQK SGAGPKNGDK YGAPYVEEEW 180 EDDELEVVPK EEAAEEVEFG DDIYLDGHDL DQILGTDTPV DGAPLPWNCY FEENASNSGE 240 TSNSFEEAQN WIQQPDEQES FDPAIQQNAN ANPVKHEFMS EPSNSVNAVD ADYLLDEPIV 300 TATENLQFND GAFLEASDLS RPIEVDTSSF DMLEEYLTFF DADDDFRSMD FNPAMMIGGD 360 DHVSDLASLE EKNIGEVTDQ PIAPSDEPED QKNSVASSSK LEPSKFGSDC KYPFMKKASC 420 MLGGIPTPPA FASEFPSKNA AFRMNSSSEA SSSIHVTGLI QITNMTMSGN AADGLLGKHG 480 NYNVTLSFSL SQHGDISAPL ESFVSVLPGK TTSTMSWYWF YYLFLWVLIL STSFKIGTLI 540 RAM

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEPKGLRKLM APGFRFHPTD EELVSYYLKR KVCGKPLRFD AISEIDIYKV EPWDLPGMSR  60
LKTRDLEWYF FSVLDRKHGN GAKTNRATER GYWKTTGKDR AVHHKSKVVG MKKTLVFHSG  120
RAPKGQRTNW VMHEYKLIDE ELVKAGIVQD ALVLCRVFQK SGAGPKNGDK YGAPYVEEEW  180
EDDELEVVPK EEAAEEVEFG DDIYLDGHDL DQILGTDTPV DGAPLPWNCY FEENASNSGE  240
TSNSFEEAQN WIQQPDEQES FDPAIQQNAN ANPVKHEFMS EPSNSVNAVD ADYLLDEPIV  300
TATENLQFND GAFLEASDLS RPIEVDTSSF DMLEEYLTFF DADDDFRSMD FNPAMMIGGD  360
DHVSDLASLE EKNIGEVTDQ PIAPSDEPED QKNSVASSSK LEPSKFGSDC KYPFMKKASC  420
MLGGIPTPPA FASEFPSKNA AFRMNSSSEA SSSIHVTGLI QITNMTMSGN AADGLLGKHG  480
NYNVTLSFSL SQHGDISAPL ESFVSVLPGK TTSTMSWYWF YYLFLWVLIL STSFKIGTLI  540
RAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-137	NAC family protein