PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48374.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 401aa MW: 45033.8 Da PI: 7.5546

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.6e-32	225	278	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PHT48374.1 225 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 278 9****************************************************7 PP
2	Myb_DNA-binding	48.8	1.7e-15	226	277	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PHT48374.1 226 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 277 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MPLEGVFVQQ PSSNNSSSKQ IPDLSLHISP PNITTSTNKS STTTNNCLTE LSLAHPTTTI 60 SEENRSFSRN PFLQQSQNNS YNMIHQQPTS QMNHINHGVS LLDVTSQNLS PIKGIPIYHH 120 QDSFSNFTNF LEKDPKRSFG SLYSPPHFSG GYYNLDHLSF LNCGTNASSP SPSPYRIPMV 180 TNRFHNQHQN SQYYGVGLGP SSHENSLMRS RFLPKFPTKR SMRAPRMRWT TSLHARFVHA 240 VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDKPAASSG QSDGSGDEDL 300 LAIDRILDQQ QRSPSDGCDD PATTLWSNSS SSRERWSQAN FNESNGLIRS SSFPPQQRSG 360 HHIEDCEYSR PMSYVGCSLD QKNPSLEFTL GRPDWIEKEH D

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MPLEGVFVQQ PSSNNSSSKQ IPDLSLHISP PNITTSTNKS STTTNNCLTE LSLAHPTTTI  60
SEENRSFSRN PFLQQSQNNS YNMIHQQPTS QMNHINHGVS LLDVTSQNLS PIKGIPIYHH  120
QDSFSNFTNF LEKDPKRSFG SLYSPPHFSG GYYNLDHLSF LNCGTNASSP SPSPYRIPMV  180
TNRFHNQHQN SQYYGVGLGP SSHENSLMRS RFLPKFPTKR SMRAPRMRWT TSLHARFVHA  240
VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDKPAASSG QSDGSGDEDL  300
LAIDRILDQQ QRSPSDGCDD PATTLWSNSS SSRERWSQAN FNESNGLIRS SSFPPQQRSG  360
HHIEDCEYSR PMSYVGCSLD QKNPSLEFTL GRPDWIEKEH D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-58	G2-like family protein