PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48291.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 459aa MW: 51392 Da PI: 6.5112

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.6	8.8e-18	6	80	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 + kewyf s++++ky++g++ + ++gyW+ g d +++ +g+l+g +ktL + +g+++k ++t+W+mheyrl PHT48291.1 6 QAKEWYFLSPSNQKYTEGSQCYSSNNDGYWEPCGADSLIHK-DGKLIGYRKTLNYNEGKHEKdRKSTEWLMHEYRL 80 678******************99**********99.99********99666515679*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MYHPSQAKEW YFLSPSNQKY TEGSQCYSSN NDGYWEPCGA DSLIHKDGKL IGYRKTLNYN 60 EGKHEKDRKS TEWLMHEYRL DRSRDVRTGS TSDDMQWVFC KLFKSSDKFL AAEDKVVTKF 120 AGPTDGVSST DHTIQGPEEA NDVMDHKGPS NGRSCDLQSL PETDQRTMTP YSSSKLLDQA 180 SKISSFDKPV TCSQRDQGTI VSTPKRQYVQ RTTVTLSPPA SDQGFMMPRL PNAKSQLTRD 240 QGTRHSPPLP QNDQRTKPPT SIGSHKANSG MVTDKDPSKS LSCDLHPQDV ASSQGLVISR 300 YSDKILDEPT GICSFDGTIA NHELGTMLPS RPQHGKQKVP PEPQYNQQTM VPPLSGIHNV 360 NNDEISAKPP TLNRHCVASD LPSSDQVPKR PLVEGSLRDS HENEAAVAPG YDGWLLYTTE 420 RLSPFNGPFE SLTEEELAFF DKPDPEYPQA YEKKRPRNY

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MYHPSQAKEW YFLSPSNQKY TEGSQCYSSN NDGYWEPCGA DSLIHKDGKL IGYRKTLNYN  60
EGKHEKDRKS TEWLMHEYRL DRSRDVRTGS TSDDMQWVFC KLFKSSDKFL AAEDKVVTKF  120
AGPTDGVSST DHTIQGPEEA NDVMDHKGPS NGRSCDLQSL PETDQRTMTP YSSSKLLDQA  180
SKISSFDKPV TCSQRDQGTI VSTPKRQYVQ RTTVTLSPPA SDQGFMMPRL PNAKSQLTRD  240
QGTRHSPPLP QNDQRTKPPT SIGSHKANSG MVTDKDPSKS LSCDLHPQDV ASSQGLVISR  300
YSDKILDEPT GICSFDGTIA NHELGTMLPS RPQHGKQKVP PEPQYNQQTM VPPLSGIHNV  360
NNDEISAKPP TLNRHCVASD LPSSDQVPKR PLVEGSLRDS HENEAAVAPG YDGWLLYTTE  420
RLSPFNGPFE SLTEEELAFF DKPDPEYPQA YEKKRPRNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	7e-19	NAC family protein