PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47860.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 283aa    MW: 31296.8 Da    PI: 10.1636
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind347.53e-10612831301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalll 86 
                 mdddg + rn+gyye++  l+enlglqlmss+ +rd+k+   r +n  + + ++++++rd          +++  rd ++++        ++k+l++ +
  PHT47860.1   1 MDDDGLNMRNWGYYEQS--LRENLGLQLMSSVVDRDTKPfltRRENPIMLGANGVFHSRDsiipeaplshIDY-VRDGWINH--------REKFLNMFP 88 
                 9*****99*******99..**********************9777888******************9999999.899***99........789999999 PP

   GAGA_bind  87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                          +++++vl++t+  +s+q++++p+ +++             + ee +++ ke+  +k++  +++pk++kakk kk s+++k++ +++   +
  PHT47860.1  89 --------GSPYTTVLPETSASHSMQMIQQPDATKD----------VGVNAEEPPSVRKESGPSKRKTGGATPKAPKAKKSKKASSVPKENGNPSV--Q 167
                 ........346899*************544333222..........22334455667778888888888999***********9999999888888..7 PP

   GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvD 284
                 r+k  kks+d+v+ng+++D++++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+D
  PHT47860.1 168 RAKPAKKSMDIVINGIDMDITGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPID 266
                 9************************************************************************************************** PP

   GAGA_bind 285 LkdhWAkHGtnkfvtir 301
                 L++hWAkHGtnkfvtir
  PHT47860.1 267 LRTHWAKHGTNKFVTIR 283
                 ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDDDGLNMRN WGYYEQSLRE NLGLQLMSSV VDRDTKPFLT RRENPIMLGA NGVFHSRDSI  60
IPEAPLSHID YVRDGWINHR EKFLNMFPGS PYTTVLPETS ASHSMQMIQQ PDATKDVGVN  120
AEEPPSVRKE SGPSKRKTGG ATPKAPKAKK SKKASSVPKE NGNPSVQRAK PAKKSMDIVI  180
NGIDMDITGI PIPVCSCTGA PQQCYRWGCG GWQSACCTTS ISMYPLPMST KRRGARIAGR  240
KMSQGAFKKV LEKLAAEGYN FANPIDLRTH WAKHGTNKFV TIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-105BBR-BPC family protein