PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT47746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 237aa MW: 26932.5 Da PI: 6.3514 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.1 | 6.7e-05 | 30 | 55 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp Cgk++ + + Lk+Hi++ H PHT47746.1 30 HICPypACGKRYAHEYKLKNHISStH 55 6799999***************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MYVHMKGGKA FSLDFNLRSH MKTHSQENYH ICPYPACGKR YAHEYKLKNH ISSTHQKNTP 60 VAPKYTPPVE KPVKTPKSTP ATYGSSSSER PYSCPYEGCD KSYIHEYKPN VLLRNMHPGH 120 LPDDNAKNAQ SAADNVMDEG SDQDTYAARR GNGRIQKQSR PKPSLKQPPL KVARKGSSSA 180 ASQANLSILK KPWPLKEENY NEEDSEETEE ERERDDVGEG WRYGENDDDD EETEEDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 7e-62 | C2H2 family protein |