PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT47722.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 333aa MW: 38264.2 Da PI: 7.5302 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.3 | 3.5e-54 | 20 | 146 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv + ++++ +i evd++kvePw+Lp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ +++l PHT47722.1 20 LPPGFRFHPTDEELITHYLSKKVVDINFSA-IAIGEVDMNKVEPWELPWKAKIGEKEWYFFCVRDKKYPTGLRTNRATAAGYWKATGKDKEIFR-GKSL 116 79*************************999.88***************98999*****************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrap+gekt+Wv heyrle PHT47722.1 117 VGMKKTLVFYKGRAPRGEKTNWVTHEYRLE 146 ****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MMENFSGVVK EDDQQQQMEL PPGFRFHPTD EELITHYLSK KVVDINFSAI AIGEVDMNKV 60 EPWELPWKAK IGEKEWYFFC VRDKKYPTGL RTNRATAAGY WKATGKDKEI FRGKSLVGMK 120 KTLVFYKGRA PRGEKTNWVT HEYRLEGRLS LHNLAKTVKN DWVICRVFQK TTGGKKIHIS 180 GLMRGSCDEN EVDNSFLPPL TDSSPNHVHC FSNFLTAQQK NQDNNNMINS FNTCPNFPVL 240 SNSIDIFPRN SLPNAFSWNQ TVPLQHNFPQ PGSFPLQDPA TLRNLLENYG QNMQQSFKKE 300 TDIISVSQET GISTDMNTEI TSTQQDLDCF WNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-130 | NAC family protein |