PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46930.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 248aa    MW: 28387.8 Da    PI: 5.2818
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.51.2e-21100150155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdp+    r kr++lg+++t+eeAak +++a+ kl+g
  PHT46930.1 100 KKFRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAAKVYDKAAVKLKG 150
                 59********.**********84....35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MISSMDTPQI IKFTQHVVTT NKHVYENDEK SNPHTKVIQK VVRIILTDPD ATDSSDDEDR  60
NTVRRVKRHV TEINLMPSPK PITEKKRRSA SPETDVTRRK KFRGVRQRPW GRWAAEIRDP  120
TRGKRVWLGT YDTPEEAAKV YDKAAVKLKG SDAVTNFPRV LKTELTVTET ESVTDGREKS  180
DDVVALSPTS VLVNGDLTPF DNFGFCEVDD FGFDVDSFFR LPEFGMPEKY YGDEFGEFDF  240
DDFALEAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
185101KKRRSASPETDVTRRKK
286102KKRRSASPETDVTRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-29ERF family protein