PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46909.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 945aa MW: 104187 Da PI: 4.6212

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	37.5	7.3e-12	381	481	33	128
NAM 33 vikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124 i+ d+y +Pw++ + +++++ yfF+k +kk++ g+r r ++ g Wk +k+v++ + +lvg kk + + ++ W+m PHT46909.1 381 NIRLEDLYGNkKPWEIFEsnslgDEDTNKNVRYFFTKLKKKKSDGSRFIRtVIGGGSWKGLDGEKSVYD-GPKLVGSKKNYRYQ-YKGYQADDVVWTMR 477 567777775438*96323332222233455**************8889***********.999****996.45556679** PP NAM 125 eyrl 128 ey+l PHT46909.1 478 EYSL 481 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MSCTVALSNS PVFSPSRVPL PSSLRCSSPE TLTASSSSPS SSPSSPLRIL RIQKPPPSNL 60 IRTGTTAAAA TTTGCSSTST VLKRKRPTRL DLPVASMSFG NFPVTPAGGV DLVEVEGEGY 120 SVCCKRGRKG AMEDRHSAMV NLQGDSKQGV FGIFDGHGGT KAAEYAAENL NKNIMTELEK 180 TTDDKIEAAE NLNKNIMTEL GKTADDKIEA AVKNGYLKTD SEFLNQEVRG GTCCVTALIQ 240 KGNLVVSNAG DCRAVVSRGG LAEALTSDHR PSREDEKDRV EASGGYVDCC HGVWRIQGSL 300 AVSRGIGDQY LKQWVTAEPE TKILGLNPEL EFLVLASDGL WDTVSNQEAV DIARPLCTGN 360 SMQQPLSACR KLIDLSVLRD NIRLEDLYGN KKPWEIFESN SLGDEDTNKN VRYFFTKLKK 420 KKSDGSRFIR TVIGGGSWKG LDGEKSVYDG PKLVGSKKNY RYQYKGYQAD DVVWTMREYS 480 LDEKILKALR QRRLIHYEDV VLCCVKGKIN VHARDHKELG DYTPSEHNNV FHELQQDQNS 540 AQLVNQVQNI KDMMAPFVAS YIEQGTANFQ DSSPVYPFTS SYKHNNAFQE LQQDQNCEQL 600 IKQVQTVDAS HDSYPVYPFT SSEHYAFHEL QQDQNSEQVN VIHQENPIEE TVPFAQYLND 660 DVTSYSEEGA TNFQEYNVDC YRGAGFSSTL ADLLNDIVTQ PQLPIRIDES GYDYQLAQQM 720 GSSSMVLNEG NIDAAAFVSD QWSTCCEEQV QNLEEAVPIT FTEPTAPLVI NNDECFPMEG 780 LFDTDDFIAA DLSWASDLFD LASTTVDTRS CWAFSAIAAT EGITKLSTGK SIFLSEQELV 840 DCDRTSEDQG CEGGYMEDAF EFIVKNKGIT TEKRHPYKAA DGSCNTKKES SSAADIKGYG 900 KVPVNNEKAL LNAVANQPVS VSIDASDFSF QSTRVEFLQA RVELN

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MSCTVALSNS PVFSPSRVPL PSSLRCSSPE TLTASSSSPS SSPSSPLRIL RIQKPPPSNL  60
IRTGTTAAAA TTTGCSSTST VLKRKRPTRL DLPVASMSFG NFPVTPAGGV DLVEVEGEGY  120
SVCCKRGRKG AMEDRHSAMV NLQGDSKQGV FGIFDGHGGT KAAEYAAENL NKNIMTELEK  180
TTDDKIEAAE NLNKNIMTEL GKTADDKIEA AVKNGYLKTD SEFLNQEVRG GTCCVTALIQ  240
KGNLVVSNAG DCRAVVSRGG LAEALTSDHR PSREDEKDRV EASGGYVDCC HGVWRIQGSL  300
AVSRGIGDQY LKQWVTAEPE TKILGLNPEL EFLVLASDGL WDTVSNQEAV DIARPLCTGN  360
SMQQPLSACR KLIDLSVLRD NIRLEDLYGN KKPWEIFESN SLGDEDTNKN VRYFFTKLKK  420
KKSDGSRFIR TVIGGGSWKG LDGEKSVYDG PKLVGSKKNY RYQYKGYQAD DVVWTMREYS  480
LDEKILKALR QRRLIHYEDV VLCCVKGKIN VHARDHKELG DYTPSEHNNV FHELQQDQNS  540
AQLVNQVQNI KDMMAPFVAS YIEQGTANFQ DSSPVYPFTS SYKHNNAFQE LQQDQNCEQL  600
IKQVQTVDAS HDSYPVYPFT SSEHYAFHEL QQDQNSEQVN VIHQENPIEE TVPFAQYLND  660
DVTSYSEEGA TNFQEYNVDC YRGAGFSSTL ADLLNDIVTQ PQLPIRIDES GYDYQLAQQM  720
GSSSMVLNEG NIDAAAFVSD QWSTCCEEQV QNLEEAVPIT FTEPTAPLVI NNDECFPMEG  780
LFDTDDFIAA DLSWASDLFD LASTTVDTRS CWAFSAIAAT EGITKLSTGK SIFLSEQELV  840
DCDRTSEDQG CEGGYMEDAF EFIVKNKGIT TEKRHPYKAA DGSCNTKKES SSAADIKGYG  900
KVPVNNEKAL LNAVANQPVS VSIDASDFSF QSTRVEFLQA RVELN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36160.1	2e-10	NAC family protein