PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46867.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 281aa    MW: 31663 Da    PI: 9.2346
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-19193227135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +l
  PHT46867.1 193 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGRL 227
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MKKSFLLPNS ASNFLTKINM VEQNYWDGTS MGPIVDEDFE NILNGLDLPM DSLEEAGLDK  60
DWDDSVYQLF GPIPSDALMT LPLDTVNGCL DAHMTNAPNE FPEAQGNVLF QRRSPISVLE  120
NSRSCSGGRN APFNFGTKGR RSKRVRSSTL SPWILMPPLP RTTFAAKKNS DAKRVKERRK  180
LSGAMASSLF RRCTHCEVTK TPQWREGPLG PKTLCNACGV RYRSGRLLPE YRPAASPTFI  240
PSLHSNSHRK VVEMRRKTVE ESPQWDSQNF VPLNNYMVDT Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.23e-58GATA family protein