PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46257.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 356aa MW: 39830.3 Da PI: 7.5573

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.9	2.3e-54	19	145	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv ++++ + +i evd++kvePwdLp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkd+e+++ ++ l PHT46257.1 19 LPPGFRFHPTDEELITHYLSKKVVDSDFFA-MAIGEVDLNKVEPWDLPWKAKMGEKEWYFFCVRDKKYPTGLRTNRATAAGYWKATGKDREIFR-GKFL 115 79***********************777.67***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgekt+Wv+he+rle PHT46257.1 116 VGMKKTLVFYKGRAPKGEKTNWVIHEFRLE 145 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MENYVGVVMD DDQHHQMELP PGFRFHPTDE ELITHYLSKK VVDSDFFAMA IGEVDLNKVE 60 PWDLPWKAKM GEKEWYFFCV RDKKYPTGLR TNRATAAGYW KATGKDREIF RGKFLVGMKK 120 TLVFYKGRAP KGEKTNWVIH EFRLEGKMSL QNLPKTAKNE WVICRVFQKS SGGKKIDISG 180 LLNLNSNENK MGNSFLATLT DPSSSSSSSS PFTGTAAKSG HVHCFSNLFT AQNSCFNNFP 240 LPVVSNPMDV FAASSLPNTF SCNQIVPVQG TFSANPGSFG VQDPMIHRTS LENYDQDFKK 300 EVVYSVSQET AVISTDMNAG ISSIVPNLEM KRPFVEDQVP SAAMVDLHGL NSLWSC

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MENYVGVVMD DDQHHQMELP PGFRFHPTDE ELITHYLSKK VVDSDFFAMA IGEVDLNKVE  60
PWDLPWKAKM GEKEWYFFCV RDKKYPTGLR TNRATAAGYW KATGKDREIF RGKFLVGMKK  120
TLVFYKGRAP KGEKTNWVIH EFRLEGKMSL QNLPKTAKNE WVICRVFQKS SGGKKIDISG  180
LLNLNSNENK MGNSFLATLT DPSSSSSSSS PFTGTAAKSG HVHCFSNLFT AQNSCFNNFP  240
LPVVSNPMDV FAASSLPNTF SCNQIVPVQG TFSANPGSFG VQDPMIHRTS LENYDQDFKK  300
EVVYSVSQET AVISTDMNAG ISSIVPNLEM KRPFVEDQVP SAAMVDLHGL NSLWSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-119	NAC family protein