PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT45912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 205aa MW: 22673.9 Da PI: 5.9431 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.6 | 6.4e-39 | 19 | 78 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ lkcprCds ntkfCyynny+lsqPr+fCk+C+ryWtkGG lrn+PvGg++rkn k+s PHT45912.1 19 QEVLKCPRCDSINTKFCYYNNYNLSQPRHFCKNCKRYWTKGGILRNIPVGGSSRKNSKRS 78 6789****************************************************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MQDPSSLIYS QIKPQFPDQE VLKCPRCDSI NTKFCYYNNY NLSQPRHFCK NCKRYWTKGG 60 ILRNIPVGGS SRKNSKRSSS SSSCSKQSLR TSSLSPSSAQ NEKIEVFTTP PVTAFDQESP 120 ILDANGPFGP FLVSNGSEIG NLLEGLNPNG PNYSGSDDAA AQSENNTTRD DEYLDVQKGE 180 DSNCWNVNTN SWADLAIYTP GSRFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 3e-35 | Dof family protein |