PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45835.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 531aa MW: 60561.6 Da PI: 4.3557

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58	3.2e-18	4	151	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka..eekew..yfFskrdkkyatgkrknra..........tks 80 G+rFhPtd+el+ +L + ++gk+l + i+e d+yk ePw + + +++++ yf ++ +k++ ++k+k+ a k PHT45835.1 4 EEGYRFHPTDSELL-TFLVRFIAGKNLYDDGYITEHDVYKQEPWVTYRygchcgG--EddGDTSIyrYFITPMHKNKIKKKNKSLAkkdrfcrivgKKL 99 68**********.99*****999889********99644665432..122444443477777666655444333234555666666679 PP NAM 81 gyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127 g+Wk++ k k+v+ + k+ ++g +k+L + +++ + +W+m+ey PHT45835.1 100 GTWKQQDKGKNVIMSsfsnqsKSFVIGRRKSLCYE-TSRSCPDDGKWLMKEYV 151 ****99998877876544445****97.5666779*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MELEEGYRFH PTDSELLTFL VRFIAGKNLY DDGYITEHDV YKQEPWVTYR YGCHCGGEDD 60 GDTSIYRYFI TPMHKNKIKK KNKSLAKKDR FCRIVGKKLG TWKQQDKGKN VIMSSFSNQS 120 KSFVIGRRKS LCYETSRSCP DDGKWLMKEY VFCDTILNRF TDSKFRDYVI CAIKRKSPKK 180 SSNGTRCSNV TTTMDTVLVS FVEPSMDQEY NATTPLQVES MVESDEPEEQ IQEAAGLEND 240 AALALTTTSQ IQEHNDWEII PILDQDFEMI RPINAVENPM ADFDEFEGEE NGFLGIQEFE 300 NTIPESSLPK ELVLLDKDQP QCVNEDHTAH LELENKDKSF LELLSGGADY SIRNNHERIQ 360 EVPGEENGHL ELYTFSQIQE PVAPDFKNAN SELNMPDIFD TLDEYMVVTV ESNEPRMQTR 420 EAAGEVNGLL GLNALFPQEP AVPENNVPEM FDMGETLLEK NQTQHQPAPQ EESETLCETG 480 QSSFVVSDLG KAMLDHTTME ERLAALRANQ SSLMSDQQSW LSKAHLQDML L

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MELEEGYRFH PTDSELLTFL VRFIAGKNLY DDGYITEHDV YKQEPWVTYR YGCHCGGEDD  60
GDTSIYRYFI TPMHKNKIKK KNKSLAKKDR FCRIVGKKLG TWKQQDKGKN VIMSSFSNQS  120
KSFVIGRRKS LCYETSRSCP DDGKWLMKEY VFCDTILNRF TDSKFRDYVI CAIKRKSPKK  180
SSNGTRCSNV TTTMDTVLVS FVEPSMDQEY NATTPLQVES MVESDEPEEQ IQEAAGLEND  240
AALALTTTSQ IQEHNDWEII PILDQDFEMI RPINAVENPM ADFDEFEGEE NGFLGIQEFE  300
NTIPESSLPK ELVLLDKDQP QCVNEDHTAH LELENKDKSF LELLSGGADY SIRNNHERIQ  360
EVPGEENGHL ELYTFSQIQE PVAPDFKNAN SELNMPDIFD TLDEYMVVTV ESNEPRMQTR  420
EAAGEVNGLL GLNALFPQEP AVPENNVPEM FDMGETLLEK NQTQHQPAPQ EESETLCETG  480
QSSFVVSDLG KAMLDHTTME ERLAALRANQ SSLMSDQQSW LSKAHLQDML L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	2e-07	NAC family protein