PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45721.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 322aa    MW: 37516.6 Da    PI: 6.3744
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.33.6e-5481361128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi+++d+y++ePwd++      ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k
  PHT45721.1   8 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVITDIDLYRIEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-K 104
                 69****************************.9***************952432234677**************************************.9 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfykgrap+g+ktdW+mheyrl
  PHT45721.1 105 EKMIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136
                 999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDQMDSCVPP GFRFHPTEEE LVGYYLKRKI NSLKIDLDVI TDIDLYRIEP WDIQDRCKLG  60
YEEQNEWYFF SHKDRKYPTG TRTNRATAAG FWKATGRDKA VLSKEKMIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRLQSTE LAPPQEEGWV VCRAFKKPSP NKQPSLEAWQ NAYYFRGANY  180
TTYRPTSSSL SEITSTPPMH HQPLNNTNAF NQPTNFHQFT SNPSHDHQNM IINNSSHNFF  240
ENQLVELPQL DSPTNISTTF CTKDTSFGEQ SYTANNNEDD RDEEKHSNGI NNSQFYGDWK  300
NFDTLVEPPS HISHLLECFP DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-103NAC family protein