PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT45693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 112aa MW: 12647.3 Da PI: 5.5585 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.2 | 9.5e-08 | 33 | 106 | 7 | 78 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeek..ew.yfFskrdkkyatgkrknrat 78 F+P deel+ yL k v gk++e ++i+ +d+y +P d+ ++ + + ++ y F++ kk++ gk+ +r++ PHT45693.1 33 FRPIDEELI-SYLLKFVCGKPIEG-DHIRMLDLYGNkKPCDIFDDLSPDGEftDVnYLFTQLMKKSTGGKNIKRTV 106 9********.9************9.89******97549****74443333333445*********99999999965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence |
MTMTMGYSPH HGDEQNNNGP FLVAHRDCTT SWFRPIDEEL ISYLLKFVCG KPIEGDHIRM 60 LDLYGNKKPC DIFDDLSPDG EFTDVNYLFT QLMKKSTGGK NIKRTVLGGG DT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 6e-07 | NAC family protein |