PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45590.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 281aa    MW: 31239.5 Da    PI: 7.3033
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.17.6e-3227257128
         NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ewyfF++rdkky++g+r+nratksgyWkatgkd++v++ k + vg +ktLvfy+grap g +tdWvmheyrl
  PHT45590.1   2 EWYFFCSRDKKYPNGSRTNRATKSGYWKATGKDRKVVC-KPAIVGYRKTLVFYRGRAPLGDRTDWVMHEYRL 72 
                 8*************************************.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEWYFFCSRD KKYPNGSRTN RATKSGYWKA TGKDRKVVCK PAIVGYRKTL VFYRGRAPLG  60
DRTDWVMHEY RLCDDASQGT PSFQGPFALC RVTKRKNISS KMSDVHGATT FKQVECSSSN  120
EAFTSAVASN EPLVLSDDIP TQTTYMSSDS NYSTPVNSPY QTTQIGNYDS AMRTNAANIW  180
MSQNMILDPS KECPQGRSIS GNYSHVFSNS TSCLPSDQYD FTSSSSFPNF GGEVVLSGDL  240
NGYGCVSPFS VHESYMKFYG NEDISDNGYN QNDSLGNANP F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-53NAC family protein