PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45027.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 448aa MW: 50305.2 Da PI: 8.8684

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.1	2.5e-16	88	178	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+k ++ps+v+ +l +pkkf+ ++ ++k+ t++l de+ ++ k+ ++k++ l++GW++F a+ L egD++vF+l+++ +f +v ++r+ PHT45027.1 88 FVKFMLPSHVSGGFWLGFPKKFC-DYHLPKHD-DTVVLVDENDEESATKYLVDKTG----LSGGWRGFSIAHSLLEGDVLVFQLIQTCKF--KVYIIRE 178 89*******************.55566655.59***********888888....************************9999..8888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MAISSLYSRK KSPALSSSKK KALEIKKKLL KQRALPPSKT IKVENGEKKK VQICLKKKVQ 60 KHTVDANSSA MLRAAEVQAN LPCQFPSFVK FMLPSHVSGG FWLGFPKKFC DYHLPKHDDT 120 VVLVDENDEE SATKYLVDKT GLSGGWRGFS IAHSLLEGDV LVFQLIQTCK FKVYIIRENS 180 LTELDGAISL LNLDFHARPI KSDHNEVMKI CEAKQEKHLE PPVINIHPDD KKEEAVLLTN 240 LDHGPVVYQR GNDSDSGSEV LEGIRFSELR VKFKDVKDYS GFTILVDGLI IDSKVPSHIR 300 TKYYDLCLTQ SSFLHDHLLN GLNVKLAAGI IAETVNIADA IRACKISTSR DYLETWDNTL 360 KGFECLGMEV GFLRARLNKL VTLSCESENN LVSKKVELAE AKEELRNLEG KVLKVKQVIQ 420 NLDSDIEALR KKDAKFELKF KALAAAPW

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MAISSLYSRK KSPALSSSKK KALEIKKKLL KQRALPPSKT IKVENGEKKK VQICLKKKVQ  60
KHTVDANSSA MLRAAEVQAN LPCQFPSFVK FMLPSHVSGG FWLGFPKKFC DYHLPKHDDT  120
VVLVDENDEE SATKYLVDKT GLSGGWRGFS IAHSLLEGDV LVFQLIQTCK FKVYIIRENS  180
LTELDGAISL LNLDFHARPI KSDHNEVMKI CEAKQEKHLE PPVINIHPDD KKEEAVLLTN  240
LDHGPVVYQR GNDSDSGSEV LEGIRFSELR VKFKDVKDYS GFTILVDGLI IDSKVPSHIR  300
TKYYDLCLTQ SSFLHDHLLN GLNVKLAAGI IAETVNIADA IRACKISTSR DYLETWDNTL  360
KGFECLGMEV GFLRARLNKL VTLSCESENN LVSKKVELAE AKEELRNLEG KVLKVKQVIQ  420
NLDSDIEALR KKDAKFELKF KALAAAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-40	B3 family protein