PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44818.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 358aa MW: 42196.4 Da PI: 6.6126

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.4	1.9e-16	5	91	1	93
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ffkv+ + +r+ +p +f++ ++gk +++++l+d g+ W +++ +k ++ +++ GW +F k+n L+ gDf++F + ++ ef l+ PHT44818.1 5 FFKVF--DPEKNAQRMKIPTSFIDYMNGK--LTRKVSLRDGFGNMWPIRV--TKIGCDFYFHYGWTKFTKDNTLEFGDFLIFDYGKNGEFDLK 91 78888..66666788******555666..6679***********..*****************************9888888655 PP
2	B3	33.2	9e-11	258	335	11	90
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +++ l++p + +++++++ ++ ++++d+ gr+++ kl+++ gr++l +GW++ ++ n ++++D+++ +++++ ++ PHT44818.1 258 KRKDELYVPVDVVRDYKLDIPS--SMIIRDSAGREFQTKLKIWSD-GRIWLVGGWRSLCNWNLVDQNDICICEFVREkCSK 335 56789*********999555..69999*******88877.5899*********************99874554 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MRKGFFKVFD PEKNAQRMKI PTSFIDYMNG KLTRKVSLRD GFGNMWPIRV TKIGCDFYFH 60 YGWTKFTKDN TLEFGDFLIF DYGKNGEFDL KLLATNGCVK KGDGGEKKRE ERNMEHQIKI 120 EPKMKNLSRD SSSGSSSDDS DEDYVEEEVE EEEENEMEPR SKHIYKEKEE EDEKEEDEDK 180 SKHIYKEKEE EDEKEEDEDK NERVGTLMNK TPHSKARCKR ATYHKVSGRH DHFGKDIFRS 240 GRAIQPENPY FIAKVRAKRK DELYVPVDVV RDYKLDIPSS MIIRDSAGRE FQTKLKIWSD 300 GRIWLVGGWR SLCNWNLVDQ NDICICEFVR EKCSKGLYLQ VQVLYEGSSS HPNKKYKK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MRKGFFKVFD PEKNAQRMKI PTSFIDYMNG KLTRKVSLRD GFGNMWPIRV TKIGCDFYFH  60
YGWTKFTKDN TLEFGDFLIF DYGKNGEFDL KLLATNGCVK KGDGGEKKRE ERNMEHQIKI  120
EPKMKNLSRD SSSGSSSDDS DEDYVEEEVE EEEENEMEPR SKHIYKEKEE EDEKEEDEDK  180
SKHIYKEKEE EDEKEEDEDK NERVGTLMNK TPHSKARCKR ATYHKVSGRH DHFGKDIFRS  240
GRAIQPENPY FIAKVRAKRK DELYVPVDVV RDYKLDIPSS MIIRDSAGRE FQTKLKIWSD  300
GRIWLVGGWR SLCNWNLVDQ NDICICEFVR EKCSKGLYLQ VQVLYEGSSS HPNKKYKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-16	B3 family protein