PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT44350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 35751.8 Da PI: 4.3301 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l +++ G g+W++ ++ g+ R++k+c++rw +yl PHT44350.1 14 KGRWTKEEDEILTNYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.5 | 3.4e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ +++++ + lG++ W+ Ia++++ gRt++++k++w++ PHT44350.1 67 RGNITSDEEAIIIKLRATLGNR-WSVIAEYLP-GRTDNEIKNYWNS 110 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MGRTPCCEKE GLKKGRWTKE EDEILTNYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LKTDLKRGNI TSDEEAIIIK LRATLGNRWS VIAEYLPGRT DNEIKNYWNS RLSRKVESLR 120 IPSDEKLPLA VVEMAKNKEI QEQIVKRQRR KRKADVPDSN FMTETSVSTS SCCNNNNNVM 180 DCNDDQMSWH DDVVLMDDKD AELDQDFIFN CLWDCQGEDL EIVENNSNNN NEVLSNDNYD 240 QLDCWNWDEI LNNEIWANEE ATRQENDNNM SHISLFDIND DVQNCMNQQV PIENVDPMQS 300 DLVAWLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 8e-67 | MYB family protein |