PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT44084.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 323aa    MW: 37288.7 Da    PI: 7.5419
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT44084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.92.4e-50321592128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPtdeelv +yL++kve++++++ e ik++diyk+ePwdLpk+ + +ekewy+++kr +ky+++ r+nr+t sg+Wkatg d++++s+   +e
  PHT44084.1  32 LPGFRFHPTDEELVGFYLRRKVEKRHINI-ELIKQIDIYKYEPWDLPKSSNMGEKEWYYYCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSStaCHE 129
                 59***************************.89***************9888999***************************************877777 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  PHT44084.1 130 CIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 159
                 8***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEVENNLSNN KVTSKCYTRE EDDHEEVEDM ALPGFRFHPT DEELVGFYLR RKVEKRHINI  60
ELIKQIDIYK YEPWDLPKSS NMGEKEWYYY CKRGRKYRNS IRPNRVTGSG FWKATGIDRP  120
IYSSTACHEC IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP AENDKSTKHI QAKSIAQEAE  180
VWTLCRIFKR NGSDKKCLPA EWRGSAAAKR SPVVDTSSQT CSTDSSSDNY VISFAAPAAI  240
VMHNNNNTIT HETKPFISGH VHDQDISNNN YCNQQLIMGQ LMSSSSVYTH QTPSSSFGQD  300
MNEWLKNGDY WDELRSILEL DRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.14e-90NAC family protein