PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT44013.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 518aa MW: 56758.1 Da PI: 7.7859

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT44013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.4	2.3e-31	169	226	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers +++++ei+Y+g+H+h+k PHT44013.1 169 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 226 8**************************************.*************85 PP
2	WRKY	105.8	2.2e-33	339	397	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PHT44013.1 339 LDDGYKWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 397 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MNLPFRKAEP SPTTGSFSKF QTVQGSGGAA AFLLTRGYSS SNSYIERKSS CFEFKNASGS 60 SSTSGSLATE HVISTGFNQQ QNDPLKEVQD QSHRQLLVPS SLAKLEMESS KELSISAPVN 120 VDASSKEESL CQPINVDAMN PGGPSNASMQ GSHADHKDVS LVTSERSSDD GYNWRKYGQK 180 LVKGSEFPRS YYKCTYPNCE VKKIFERSPE GQITEIVYKG SHDHPKPQLC RRFSPGSLVS 240 IQEDKSEKEA CFRGQEDKFN TNVQTNKIEP GCTPVSPQTD TDALEGAASQ MQGTNDDMDE 300 DDQFAKRRKM DGGMDVTPVI KPIREPRVVV QTVSEVDILD DGYKWRKYGQ KVVRGNPNPR 360 SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT ARNNNPEMTG STPVTGGSRI 420 RAEQTNSLSL DLGVGTGYHL DNGNNGQLHT LHNQVQVSRS GMILVQPGAV VARYGIVHNG 480 MSRFGAIDNR VQGPSFETLP LQPSTQSLQS YGKILLGP

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MNLPFRKAEP SPTTGSFSKF QTVQGSGGAA AFLLTRGYSS SNSYIERKSS CFEFKNASGS  60
SSTSGSLATE HVISTGFNQQ QNDPLKEVQD QSHRQLLVPS SLAKLEMESS KELSISAPVN  120
VDASSKEESL CQPINVDAMN PGGPSNASMQ GSHADHKDVS LVTSERSSDD GYNWRKYGQK  180
LVKGSEFPRS YYKCTYPNCE VKKIFERSPE GQITEIVYKG SHDHPKPQLC RRFSPGSLVS  240
IQEDKSEKEA CFRGQEDKFN TNVQTNKIEP GCTPVSPQTD TDALEGAASQ MQGTNDDMDE  300
DDQFAKRRKM DGGMDVTPVI KPIREPRVVV QTVSEVDILD DGYKWRKYGQ KVVRGNPNPR  360
SYYKCTNAGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT ARNNNPEMTG STPVTGGSRI  420
RAEQTNSLSL DLGVGTGYHL DNGNNGQLHT LHNQVQVSRS GMILVQPGAV VARYGIVHNG  480
MSRFGAIDNR VQGPSFETLP LQPSTQSLQS YGKILLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-122	WRKY family protein