PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 213aa MW: 23482.1 Da PI: 9.297 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.9 | 2.7e-12 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kktLvfy+grapkgek++Wvmheyrl PHT43824.1 1 MKKTLVFYRGRAPKGEKSNWVMHEYRL 27 8************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MKKTLVFYRG RAPKGEKSNW VMHEYRLDGK FAYHYISRSS KDEWVISRVF QKSATATTGT 60 ATSNGGKKRP SSSINNMYQE VSSPSSVSHL PPLLDSSPYS TTATSSSVVI GARDHSFKKE 120 HVSCFSTTAT NSATIDPHSV FDISNTLHAL PFTHYGRNST FPSLTSLHEN LQLPLFSGGA 180 SAMHGGFSNS IGNWSVPETQ KVEQSELDCM WTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 1e-28 | NAC family protein |