PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 27463.4 Da PI: 9.6975 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.1 | 1.2e-25 | 44 | 165 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 GfrFhPtd el+ +yL v +k+++ i d+y++ePwd+ k ++++ +yfF++ +kk++ ++r r++ +g Wk++ k k+v+s+kg+ g PHT43749.1 44 EGFRFHPTDRELM-KYLILFVISKPFSKLVPIVLEDLYTIEPWDIF-K-GKKDRALYFFTELKKKKTGNTRYVRSVGEGSWKSQDKGKAVCSEKGSILG 139 7************.9**********9997779999**********6.3.3567899******************************************* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 k++L + + p + +W+m+ey++ PHT43749.1 140 YKRSLRYQNPGLPL-HDGQWLMKEYSI 165 *******9655555.799*******86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MSLARRHPFK QPRTIPSTSY LPTTSYQTRM EYNKEVQENS AHTEGFRFHP TDRELMKYLI 60 LFVISKPFSK LVPIVLEDLY TIEPWDIFKG KKDRALYFFT ELKKKKTGNT RYVRSVGEGS 120 WKSQDKGKAV CSEKGSILGY KRSLRYQNPG LPLHDGQWLM KEYSICDDVK KHLRQRFHEY 180 NKEHYVLCRV KRKVGKDEDG IAPKETIIDE EINDIIGSND AADTLAIDIN RPFHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 4e-24 | NAC family protein |