PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43742.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 362aa    MW: 40894.5 Da    PI: 7.0499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08203248754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  +Er+RR+++ + +++Lr l+P+       +K   ++ Le+ v+Y+k+L
  PHT43742.1 203 DVERQRRRDMAKLYQRLRLLIPSkY---LMGKRAISDHLEEIVDYVKDL 248
                 69*********************77...999****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MRGSQIPALI SYQLLNFLSP PTLQEQNSSI SLQTQNCNDI DSHQKNKSIT TITTTTIFDD  60
QLLNFLSSPP PSPRPPLTST LQKEDDSSIS LQTQSLNDLD SHQKNEPIIT TTATTIFDDD  120
QLLNFLSSPP PSLPPLTSTL QRKDDSSISF QTQSSNGLDS HQKDEPISTT TTIVDDYQVQ  180
DPMKEKEVEG KKKKKKKNVL RRDVERQRRR DMAKLYQRLR LLIPSKYLMG KRAISDHLEE  240
IVDYVKDLRR DIEDLERKRE GLKEKKNIIA PSSYSYSMKL SDDEDRIVVK YSCNEEVEIS  300
VKGGISLSKV VKVVMKEGLI VNSCVSTMVD QSLLHIIQSK VNIGGDIDLA MQRSKLLTLS  360
SP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191197KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.16e-13bHLH family protein