PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42926.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 626aa MW: 71275.1 Da PI: 5.6602

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.1	3.6e-14	443	512	18	91
--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +p +f ++ +gk +k+++l+d+ ++ W +++ +k +++++++ GW +F k+n+L+ gDf++F ++g++ f+ PHT42926.1 443 MPISFR-DYkNGK--LPKKVSLRDRLSNMWPIRV--SKIGREFFFQYGWPKFIKDNKLEHGDFLIFDYVGNRIFS 512 445553.442333..7889*************..******************************9987773 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MMDHAWPLLP GAPEKIDNGK QDKKEVVEKT IPLPPPPFLQ RVKKKVDDTP KKADNRKQYE 60 KQVVEKTIPL PPPPFPQRLK KKTDDTRFSK FMTMLKQLTI NVPLVEALEQ MPGYAKFMKD 120 LLTKKRAVSY ELVDDVHRCS AIATRSLVQK KADPGAFSIP CTIGSLDFAK ALCDLGASIN 180 LMPLSIYKKL GLGDPTPTDM WLVMADRSVK RPVGILNDVL VKVSTFIFHA DFVILDCEVD 240 SEVPIILGRP FLATGSVLID LRANELLFWL NDEVVRFDVC KSMKQPKDLN VFLIANDYFD 300 DEKELSVEEK LIVDPLAAVL MNVEREDAEK HEETVCALTG IRSYSHIPKK LDLDLKNLPS 360 PTVKTSIEEP PGLESKELPR YAFLGSENTL LVSVAVDLSE QHVEALISAL KRYKRAMGWM 420 IDNIIGISPG ICMHKSHLEE DCMPISFRDY KNGKLPKKVS LRDRLSNMWP IRVSKIGREF 480 FFQYGWPKFI KDNKLEHGDF LIFDYVGNRI FSFKLLGTNR REQKEDGGLK LGVMDEAEEL 540 NIEHQNSLDP KWKNWASNSS SSSSSDGSDK DSLEDEDKDY NQTKKVPCSK CKDVQEKEDG 600 EEEEQFEEEE KDKEKTKMVT FNKVID

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MMDHAWPLLP GAPEKIDNGK QDKKEVVEKT IPLPPPPFLQ RVKKKVDDTP KKADNRKQYE  60
KQVVEKTIPL PPPPFPQRLK KKTDDTRFSK FMTMLKQLTI NVPLVEALEQ MPGYAKFMKD  120
LLTKKRAVSY ELVDDVHRCS AIATRSLVQK KADPGAFSIP CTIGSLDFAK ALCDLGASIN  180
LMPLSIYKKL GLGDPTPTDM WLVMADRSVK RPVGILNDVL VKVSTFIFHA DFVILDCEVD  240
SEVPIILGRP FLATGSVLID LRANELLFWL NDEVVRFDVC KSMKQPKDLN VFLIANDYFD  300
DEKELSVEEK LIVDPLAAVL MNVEREDAEK HEETVCALTG IRSYSHIPKK LDLDLKNLPS  360
PTVKTSIEEP PGLESKELPR YAFLGSENTL LVSVAVDLSE QHVEALISAL KRYKRAMGWM  420
IDNIIGISPG ICMHKSHLEE DCMPISFRDY KNGKLPKKVS LRDRLSNMWP IRVSKIGREF  480
FFQYGWPKFI KDNKLEHGDF LIFDYVGNRI FSFKLLGTNR REQKEDGGLK LGVMDEAEEL  540
NIEHQNSLDP KWKNWASNSS SSSSSDGSDK DSLEDEDKDY NQTKKVPCSK CKDVQEKEDG  600
EEEEQFEEEE KDKEKTKMVT FNKVID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34400.1	3e-11	B3 family protein