PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42708.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 160aa    MW: 18164.6 Da    PI: 7.663
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.45.9e-193483252
         NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52
                 pGfrFhPtdeel+ +yL++kve+k+++l + ikevdiyk++PwdLp++++
  PHT42708.1 34 LPGFRFHPTDEELLGFYLRRKVENKRIKL-DLIKEVDIYKHDPWDLPHNIY 83
                69***************************.99**************96543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MSEKRVDKSE AMESIGGEGK SKSTADDEEK ELILPGFRFH PTDEELLGFY LRRKVENKRI  60
KLDLIKEVDI YKHDPWDLPH NIYNTSGFGP LQNFLDFGLS GLGTTQGYHS YPWIRVWGWL  120
DGSLVCWAVS SRGSVKRSFV KYRIQPGLGV DPTGNSLANK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-26NAC family protein