PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41713.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 385aa MW: 44834.4 Da PI: 8.5757

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.3	4.2e-16	6	88	2	93
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 fk +sd + +rl +p f+ ++ +gk + +++l+d+ g+ W++++ +k++++++++ GW +F ++n ++ gDf++F +dg+ f PHT41713.1 6 FKLY-SSD--SAKRLKIPTGFT-DYkNGK--LPWKVSLRDRFGNMWTIEV--TKTGREFYFQYGWVKFIEDNTVEFGDFFIFDYDGNGIF--D 88 5544.333..33569****9.663555..8999***********..******************************998666..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEKGFFKLYS SDSAKRLKIP TGFTDYKNGK LPWKVSLRDR FGNMWTIEVT KTGREFYFQY 60 GWVKFIEDNT VEFGDFFIFD YDGNGIFDFK LLGKTGCEKK GVGGLKLDVK EEEEEEISVE 120 NRKNVQSKAK NWASDSTSSS SDDDSDEECY IVEEEEEEDE KYEETEKVPC SKHRYVAVCK 180 ARDRHDPLGT DIFRSGRATQ PKNPYFVAKI IPKRRNQLFI PLDVVRGYKL KLPSSMTIRD 240 SVGREFEAKC KSWKDGYFLA LHYTVGTRRI LEIVNHRLLV WAPGSCLFVK IAFLLAVCVC 300 VKKAGKMIWL HDGWQEFMEH HSVSYCYFLL FKYGQNSSLN VHKFDLAATE TDYLVRSHGI 360 RIFLTERKKL WGTRMARAVL KLWIP

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEKGFFKLYS SDSAKRLKIP TGFTDYKNGK LPWKVSLRDR FGNMWTIEVT KTGREFYFQY  60
GWVKFIEDNT VEFGDFFIFD YDGNGIFDFK LLGKTGCEKK GVGGLKLDVK EEEEEEISVE  120
NRKNVQSKAK NWASDSTSSS SDDDSDEECY IVEEEEEEDE KYEETEKVPC SKHRYVAVCK  180
ARDRHDPLGT DIFRSGRATQ PKNPYFVAKI IPKRRNQLFI PLDVVRGYKL KLPSSMTIRD  240
SVGREFEAKC KSWKDGYFLA LHYTVGTRRI LEIVNHRLLV WAPGSCLFVK IAFLLAVCVC  300
VKKAGKMIWL HDGWQEFMEH HSVSYCYFLL FKYGQNSSLN VHKFDLAATE TDYLVRSHGI  360
RIFLTERKKL WGTRMARAVL KLWIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	5e-13	B3 family protein