PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT41656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 195aa MW: 22353.7 Da PI: 4.4787 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122.8 | 3e-38 | 8 | 127 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrF Ptdeelvv++L++kv+ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t++gyWk+ g d++++s+ +++ PHT41656.1 8 LPPGFRFYPTDEELVVHFLHRKVALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGNKWYFYSRRTQ--------SRITENGYWKSLGVDEPIFSSsSDS 97 79*************************999.99**************977778899******9854........799****************986777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kk +fy g++p+g kt+Wvm+e++l PHT41656.1 98 NIGMKKYYAFYLGEKPEGAKTNWVMQEFSL 127 8***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGDSNVNLPP GFRFYPTDEE LVVHFLHRKV ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GNKWYFYSRR TQSRITENGY WKSLGVDEPI FSSSSDSNIG MKKYYAFYLG EKPEGAKTNW 120 VMQEFSLSDS SSASASSRSS SRRKNRSKID YSGWVICRVY ERNCDNDDDD NGTELSCLDE 180 VFLSLDDLDE ISLPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 2e-77 | NAC family protein |