PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40691.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 223aa    MW: 24441.4 Da    PI: 6.5385
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-173282155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + ++GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  PHT40691.1 32 PVFRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPNPEMAARAHDVAALSIKG 82
                579****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MMNSAGGAQD NKDESEISNK KIKRNRDSSK HPVFRGVRMR NWGKWVSEIR EPRKKSRIWL  60
GTFPNPEMAA RAHDVAALSI KGNSAILNFP ELAASLPRPV TLSPRDIQVA AAKAAAMDKF  120
DNNNNNNITS PNNSSTTTTS TPPSSNVSPS SSLSSLVSAI DLATSEELTQ IIELPRLGTS  180
FFGDELKNDF VFADCSTMET GWLYPEDAGI ISSCFEPSLL WNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-61ERF family protein