PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40673.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 349aa    MW: 38780.4 Da    PI: 6.7486
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.82.6e-17243277135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  PHT40673.1 243 CLHCATNKTPQWRTGPMGPKTLCNACGVRYKSGRL 277
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDVETPEFFD AKNGDHFVED FLDLPNDDGM VTDGTLDATV TGNSTGCSVL GNSCNSSMSG  60
SHHGPQLLGD NIGYRNFSEG HFSNEFPVPY EDLVELEWLS NFVEESFSSN DTQKTQMMQA  120
MKSRTDSEIH QFIPDPNLSF AASSAQTFKP EMPVPAKARS KRSRMAPGNW ASRLLVVSPN  180
TITPESLMDP TSMQDMSSSS EFGMIIPSSG KKTVKSSTPK KKDSTTSHHG PSNMASNTEG  240
RKCLHCATNK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV LTKHSNSHRK  300
VLEIRRQKEV ITRAEHQHQF LPQNMMFDVS NTDDYLIHQH IGPDFRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.17e-80GATA family protein