PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40335.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 575aa MW: 64837.1 Da PI: 6.6739

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4.1e-09	494	532	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e++ LA k gLt +qV++WF N R + PHT40335.1 494 MFQNflHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVR 532 5887779******************************88 PP
2	BELL	70.2	3.6e-23	367	434	3	71
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 ++ ++kk L+ ll+ Vd++Y+q+ +++++vis+F+av++l++ +++++Alk+iS +++L+++i++ PHT40335.1 367 MDSEAKKKNLVALLQVVDEQYNQCLDEIHMVISAFHAVTELDP-CIHARFALKTISSLYKNLRERISNY 434 67899************************************.9*******************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MPLEMTQPHT IIDENYLHTA IVPISFPDTV CLNNQKNIMY GQNHIMDGQE IPYPSMLQGE 60 IIKSSQGCLN LPNFPRAVET EAIHNVLPAG RNRIKGSSFS TSYPISNSYT EDQHMEGIPI 120 SAVSLANLLA ARNAVHENLE NLAVVAPFSH PAEGQKIDGL DYPNVLNHSF GSYRNYEFDG 180 VPEIPGMVLG RAQSQPFQLT ENVNSNTWFS SETASLSSDS PSGFSGFSNE LCLSLTTSQS 240 AVVCGPTIQD QCSDISCSGV TNHAFPQRHF DSELTSCNSR NLSLNFVSYK PVHLSQFLTA 300 SRYLRVMQEI LSEIAQLSLQ NHNLLGYRGM DCGANTLSAL SSDSARGYAA LHSDDLPDAD 360 HRFIGQMDSE AKKKNLVALL QVVDEQYNQC LDEIHMVISA FHAVTELDPC IHARFALKTI 420 SSLYKNLRER ISNYILAMGE HFNKGGERGV EKSFETAFIQ KQWALQQLKR KDHQLWRPQR 480 GLPERSVSVL RAWMFQNFLH PYPKDAEKQL LAVKSGLTRS QVSNWFINAR VRLWKPMIEE 540 MYAEMNRRKI HTGNEDEANH RRNHRIIENH LFTMH

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MPLEMTQPHT IIDENYLHTA IVPISFPDTV CLNNQKNIMY GQNHIMDGQE IPYPSMLQGE  60
IIKSSQGCLN LPNFPRAVET EAIHNVLPAG RNRIKGSSFS TSYPISNSYT EDQHMEGIPI  120
SAVSLANLLA ARNAVHENLE NLAVVAPFSH PAEGQKIDGL DYPNVLNHSF GSYRNYEFDG  180
VPEIPGMVLG RAQSQPFQLT ENVNSNTWFS SETASLSSDS PSGFSGFSNE LCLSLTTSQS  240
AVVCGPTIQD QCSDISCSGV TNHAFPQRHF DSELTSCNSR NLSLNFVSYK PVHLSQFLTA  300
SRYLRVMQEI LSEIAQLSLQ NHNLLGYRGM DCGANTLSAL SSDSARGYAA LHSDDLPDAD  360
HRFIGQMDSE AKKKNLVALL QVVDEQYNQC LDEIHMVISA FHAVTELDPC IHARFALKTI  420
SSLYKNLRER ISNYILAMGE HFNKGGERGV EKSFETAFIQ KQWALQQLKR KDHQLWRPQR  480
GLPERSVSVL RAWMFQNFLH PYPKDAEKQL LAVKSGLTRS QVSNWFINAR VRLWKPMIEE  540
MYAEMNRRKI HTGNEDEANH RRNHRIIENH LFTMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-100	TALE family protein