PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39688.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 312aa    MW: 35809.1 Da    PI: 6.5693
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.3e-49111391128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eel+++yL+kk++++k++l +vi+evd++k+ePwd+++k+k     +++wy Fs++dkky+tg+r+nrat++g+Wkatg+dk ++  k
  PHT39688.1  11 VPPGFRFHPTEEELLHYYLRKKIANDKIDL-DVIREVDLNKMEPWDIQEKCKIgstPQNDWYLFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYG-K 107
                 69****************************.9***************964444222455*************************************9.7 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +g++ktLvfy+grap+g k dW+mheyrl
  PHT39688.1 108 CKRIGMRKTLVFYRGRAPHGLKLDWIMHEYRL 139
                 789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKIANDKIDL DVIREVDLNK MEPWDIQEKC  60
KIGSTPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYGKCKR IGMRKTLVFY  120
RGRAPHGLKL DWIMHEYRLD DNSTTQDHQA DVNFCASESG GVEEGWVVCR IFKKKSSLEI  180
PQSSPSTVQK PNTDGVLDQI LMYMGRSSCK QQQHETKNNN PNIQFESSFL HLPELVNHHH  240
PTTNNDMEVL IHQDCSFDEM FVSTGTDQIN SPACDWLALD RLVASQLNGH FDIPTNNNTA  300
RSNDDDGTEF WS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.11e-100NAC family protein