PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 27469.3 Da PI: 9.2453 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.1 | 5.8e-07 | 80 | 126 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ ++++ L +llP +K +K +i++ A++ I +Lq PHT38836.1 80 KHMIKERIRREKQKQSYLALHKLLPMG-----TKGEKNAIVQTATRRIEELQ 126 68999********************97.....7*****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEEFFQISWF CDDETYNNFE VNRSAFVSFE SKLSEEFGVY SYGSVSMNHR NMNKRVMEFL 60 KKNWISKNGQ VKMEKKKGHK HMIKERIRRE KQKQSYLALH KLLPMGTKGE KNAIVQTATR 120 RIEELQKYKE NLKKRNDELE MMILAENDSN NEDFDKAKIK TKVNNPISGI DSMLEVLKCL 180 KNCGAKANSI QSSFSLQEFS TIIEIETKSG AGEIEKAVQN TLFEAERNFG AHWYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 4e-44 | bHLH family protein |