PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37341.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 682aa MW: 78342 Da PI: 6.7508

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58.8	1.9e-18	2	130	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdke 91 ++G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + + + + k++ yfF+k +kk+a g+r ++ g Wk +k+ PHT37341.1 2 AMGIRFHPRDEELI-RYLLKFVSCKNYSC-HNIQFEDLYGNkKPWEIFEsnstR--GdeDAKKVkYFFTKLKKKKADGRRFIWtVIGGGSWKGLDGEKS 96 68**********.9*******999.779999996549**6323322..222333336***********9997889******** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++ + + vg kk + + ++ W+m e + PHT37341.1 97 IYD-GPKIVGSKKNYRYQ-YKGYQADDVVWTMRENS 130 .999*****996.455556699**9966 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFESN STRGDEDAKK 60 VKYFFTKLKK KKADGRRFIW TVIGGGSWKG LDGEKSIYDG PKIVGSKKNY RYQYKGYQAD 120 DVVWTMRENS LDEKILKALR RRSLMHYEYV VLCCVKHKIN VHARDHKELR DCMPIEITSG 180 DEVVVAMDAT FQTAQQHDSC VLNRFTSSSE HNNVFHELQQ DQNSEQLINQ VQNIEDMAPF 240 AQNHNGYVES YIEQGTTNFQ DSCPVYPSTL SEHNAFQLQQ DQNCEQVNVV QENNIEETTS 300 FAQYHNDDVT CYSVEGATNF KDYNVDCYTY TGADFSSTLA DLLNDIGTQP QLPIGINVHA 360 RDHKELGDYT LMEIPSGDEV VAAMDARLLT TQQYDSCLLN PFTSSEHNNV FHELQQDQSS 420 SGGNKRCSFT SPLYVYNGSL AKTLLRNYIL SGLQDDLYNV YSGTKTSKER WGALERKYKM 480 EDAGIKKFLF ARFLDFKMID SKSVVSQVQE LQVIIQDLLA EGLIVNDAFQ EMTVEDLIVR 540 LRIEEDNKAA ERRSKENSTM NGAHIVEDGQ NKSKKRKKVE HGSTQPKKKF KEKCFNCGKI 600 GQKSTDCRAS KKGKKKGQKN MIESNKEYDD LCAMFMECNL VGNPYEWWMD SGATRHICAN 660 KELFSSFSSS RRNALHGQLR YC

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFESN STRGDEDAKK  60
VKYFFTKLKK KKADGRRFIW TVIGGGSWKG LDGEKSIYDG PKIVGSKKNY RYQYKGYQAD  120
DVVWTMRENS LDEKILKALR RRSLMHYEYV VLCCVKHKIN VHARDHKELR DCMPIEITSG  180
DEVVVAMDAT FQTAQQHDSC VLNRFTSSSE HNNVFHELQQ DQNSEQLINQ VQNIEDMAPF  240
AQNHNGYVES YIEQGTTNFQ DSCPVYPSTL SEHNAFQLQQ DQNCEQVNVV QENNIEETTS  300
FAQYHNDDVT CYSVEGATNF KDYNVDCYTY TGADFSSTLA DLLNDIGTQP QLPIGINVHA  360
RDHKELGDYT LMEIPSGDEV VAAMDARLLT TQQYDSCLLN PFTSSEHNNV FHELQQDQSS  420
SGGNKRCSFT SPLYVYNGSL AKTLLRNYIL SGLQDDLYNV YSGTKTSKER WGALERKYKM  480
EDAGIKKFLF ARFLDFKMID SKSVVSQVQE LQVIIQDLLA EGLIVNDAFQ EMTVEDLIVR  540
LRIEEDNKAA ERRSKENSTM NGAHIVEDGQ NKSKKRKKVE HGSTQPKKKF KEKCFNCGKI  600
GQKSTDCRAS KKGKKKGQKN MIESNKEYDD LCAMFMECNL VGNPYEWWMD SGATRHICAN  660
KELFSSFSSS RRNALHGQLR YC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	574	578	KKRKK
2	574	615	KKRKKVEHGSTQPKKKFKEKCFNCGKIGQKSTDCRASKKGKK
3	575	616	KKRKKVEHGSTQPKKKFKEKCFNCGKIGQKSTDCRASKKGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15170.1	2e-09	NAC family protein