PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37309.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 800aa MW: 91612.6 Da PI: 6.9247

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63.2	7.9e-20	2	130	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdke 91 ++G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + + + + k++ yfF+k +kk+a g+r r ++ g Wk +k+ PHT37309.1 2 AMGIRFHPRDEELI-RYLLKFVSCKNYSC-HNIQFEDLYGNkKPWEIFEsnstR--GdeDAKKVkYFFTKLKKKKADGRRFIRtVIGGGSWKGLDGEKS 96 68**********.9*******999.779999996549**6323322..222333336**************8889******** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++ + + vg kk + + ++ W+m e + PHT37309.1 97 IYD-GPKIVGSKKNYRYQ-YKGYQADDVVWTMRENS 130 .999*****996.455556699**9966 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFESN STRGDEDAKK 60 VKYFFTKLKK KKADGRRFIR TVIGGGSWKG LDGEKSIYDG PKIVGSKKNY RYQYKGYQAD 120 DVVWTMRENS LDEKILKALR RRSLMHYEYV VLCCVKHKIN VHARDHKELR DCMPIEITSG 180 DEVVVAMDAT FQTAQQHDSC VLNRFTSSSE HNNVFHELQQ DQNSEQLINQ VQNIEDMAPF 240 AQNHNGYVAS YIEQGTTNFQ DSCPVYPSTL SEHNAFQLQQ DKNCEQVNVV QENNIEETTS 300 FAQYHNDDVT CYSVEGATNF QDYNVDCYTY TGADFSSTLA DLLNDIGTQP QLPIGINVYA 360 RDHKELGDYT LMEIPSGDEI VAAMDARLLT TQQHDSCLLN PFTSSEHNNV FHELQQDQSS 420 SGGNKRCSFT SPLYVYNDFL CRNYILSGLQ DDLYNVYSGT KTSKERWGAL ERKYKMEDAG 480 IKKFLIARFL DFKMIDSKSV VSQVQELQVI IQDLLAEGLI VNDAFQVAEI VEKLPPLWKD 540 FKNYLKHKRK EMTVEDLIVR LRIEEDNKAA ERRSKENSIM NGAHIVEDDQ NKSKKRKKVE 600 HGSNQPKKKF KEKCFNCGKI GQKSTDCRAS KKGKKKGQTN MIESNKEYDD LCAMFTECNL 660 VGNPYEWWMD SGATRHICAN KELFSSFASA QLEEMLYMAN SVTAKVEGTG KIFLKMTSGK 720 VLTLNNVLYI PKLCRNLTSA SLLDQNGFKC ITVSGKIVVS KGEMYVGKGY FTEGLYKMNV 780 MTVEMNKSSN SSYLLESYDL

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFESN STRGDEDAKK  60
VKYFFTKLKK KKADGRRFIR TVIGGGSWKG LDGEKSIYDG PKIVGSKKNY RYQYKGYQAD  120
DVVWTMRENS LDEKILKALR RRSLMHYEYV VLCCVKHKIN VHARDHKELR DCMPIEITSG  180
DEVVVAMDAT FQTAQQHDSC VLNRFTSSSE HNNVFHELQQ DQNSEQLINQ VQNIEDMAPF  240
AQNHNGYVAS YIEQGTTNFQ DSCPVYPSTL SEHNAFQLQQ DKNCEQVNVV QENNIEETTS  300
FAQYHNDDVT CYSVEGATNF QDYNVDCYTY TGADFSSTLA DLLNDIGTQP QLPIGINVYA  360
RDHKELGDYT LMEIPSGDEI VAAMDARLLT TQQHDSCLLN PFTSSEHNNV FHELQQDQSS  420
SGGNKRCSFT SPLYVYNDFL CRNYILSGLQ DDLYNVYSGT KTSKERWGAL ERKYKMEDAG  480
IKKFLIARFL DFKMIDSKSV VSQVQELQVI IQDLLAEGLI VNDAFQVAEI VEKLPPLWKD  540
FKNYLKHKRK EMTVEDLIVR LRIEEDNKAA ERRSKENSIM NGAHIVEDDQ NKSKKRKKVE  600
HGSNQPKKKF KEKCFNCGKI GQKSTDCRAS KKGKKKGQTN MIESNKEYDD LCAMFTECNL  660
VGNPYEWWMD SGATRHICAN KELFSSFASA QLEEMLYMAN SVTAKVEGTG KIFLKMTSGK  720
VLTLNNVLYI PKLCRNLTSA SLLDQNGFKC ITVSGKIVVS KGEMYVGKGY FTEGLYKMNV  780
MTVEMNKSSN SSYLLESYDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	594	598	KKRKK
2	594	635	KKRKKVEHGSNQPKKKFKEKCFNCGKIGQKSTDCRASKKGKK
3	595	636	KKRKKVEHGSNQPKKKFKEKCFNCGKIGQKSTDCRASKKGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15170.1	3e-09	NAC family protein