PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37236.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 581aa MW: 65733.4 Da PI: 4.1506

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.7	6.6e-21	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pwd+ + ++ + + k++ yfF+k +kk++ g+r r ++ g Wk +k+v+ PHT37236.1 4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkQPWDIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSVY 99 59*********.9******999.7899999996549632322.2333333335**************8889************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +lvg kk + + ++ W+m ey+l PHT37236.1 100 D-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99******996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKQPWDIFES NSTGGDGDAK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRSLMHYED VVLCCVKRKI NVHARDHKEL SDCMPMEITS 180 GDEFAAAMDA TLQTTQQYDS CLLNRFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEEAAP 240 FARNHYGYVA SYIEQGTANF HDSCPVYPST LSEHNAFQLQ QDQNSEQVNV VQENIIEEAV 300 PLAQYHNDDV TSYSEKGATN FQDYNIDCYT GYFFKATFSS TLADLLNDIG TQPQLPPICI 360 DESGYDYQLP QQIVTGNEVV AAMDGTLLTT QQPDSCLLNS FTSSEHNNVF HEFQQDQNSE 420 QLINQVQTID EMVSSAQNHN DDITSYSEKG ATNFQDYDID CYTGADFSST LADLLNDIGT 480 QPQLPICIDE SGCNYQLPQQ IGSTCMVLNE GNTDVAAFVS DQWSVCGEDQ VQNLEEAAPI 540 TFTEPTAPLA INSDERFSME GLFDIDDFIA ADFSWASDLF D

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKQPWDIFES NSTGGDGDAK  60
NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRSLMHYED VVLCCVKRKI NVHARDHKEL SDCMPMEITS  180
GDEFAAAMDA TLQTTQQYDS CLLNRFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEEAAP  240
FARNHYGYVA SYIEQGTANF HDSCPVYPST LSEHNAFQLQ QDQNSEQVNV VQENIIEEAV  300
PLAQYHNDDV TSYSEKGATN FQDYNIDCYT GYFFKATFSS TLADLLNDIG TQPQLPPICI  360
DESGYDYQLP QQIVTGNEVV AAMDGTLLTT QQPDSCLLNS FTSSEHNNVF HEFQQDQNSE  420
QLINQVQTID EMVSSAQNHN DDITSYSEKG ATNFQDYDID CYTGADFSST LADLLNDIGT  480
QPQLPICIDE SGCNYQLPQQ IGSTCMVLNE GNTDVAAFVS DQWSVCGEDQ VQNLEEAAPI  540
TFTEPTAPLA INSDERFSME GLFDIDDFIA ADFSWASDLF D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-11	NAC family protein