PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37230.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 303aa MW: 35030.6 Da PI: 6.9756

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.2	5.6e-22	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk...kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 G+rFhPtdeel+ +yL k v+ k+ ++ + i+ d+y +Pwd+ + + + ++k++ yfF+k +kk++ g+r r ++ g Wk +k+v PHT37230.1 4 LGIRFHPTDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWDIFEsnsT--GgdgDTKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSV 98 59*********.9******999.7899999996549632331..2333333335**************8889********* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +lvg kk + + ++ W+m ey+l PHT37230.1 99 YD-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99*******996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MEILGIRFHP TDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWDIFES NSTGGDGDTK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRCLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS 180 GDEVVAAAMD ATLQTTQQHK HNNVFQELQQ DQNSEQLINQ VQNIEDVAPF AQNHNGYVAS 240 YIEQGTVNFQ DSCPVYPCTS SEHNNAFQEL QQDQNSEQGQ QIFKTTTLIV IQGLIFHRHW 300 LIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-12	NAC family protein