PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37229.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 523aa MW: 59499.8 Da PI: 4.452

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.6	1.7e-21	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk...kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 G+rFhPtdeel+ +yL k v+ k+ ++ + i+ d+y +Pwd+ + + + ++k++ yfF+k +kk++ g+r r ++ g Wk +k+v PHT37229.1 4 LGIRFHPTDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWDIFEsnsT--GgdgDTKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSV 98 59*********.9******999.7899999996549632331..2333333335**************8889********* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +lvg kk + + ++ W+m ey+l PHT37229.1 99 YD-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99*******996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MEILGIRFHP TDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWDIFES NSTGGDGDTK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRCLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS 180 GDEVVAAAMD ATLQTTQQHK HNNVFQELQQ DQNSEQLINQ VQNIEDVAPF AQNHNGYVAS 240 YIEQGTVNFQ DSCPVYPCTS SEHNNAFQEL QQDQNSEQVN VVQGNNIEEI VPFAQYHNGD 300 VTSYSEEGAT DFQDYNIDCY TGADFSSTLA DLLKDIGTQP QLPIGVNVHA RDHKELGDYT 360 PMELPSGDEV VAAMDATLLT TQQHHSCLLN PFTSSEHNNV FHELQQDQSS EQLINQVQTL 420 DEMVSSDQYH NDDVTSYSEK GATNFQDYNV DCYTGYFFKA TFSSTLAYLL NDIGTQPQLP 480 PICIDESGYD YQLPQKIVTC PMAQRSTDFS SQSELYDLSE NIF

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MEILGIRFHP TDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWDIFES NSTGGDGDTK  60
NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRCLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS  180
GDEVVAAAMD ATLQTTQQHK HNNVFQELQQ DQNSEQLINQ VQNIEDVAPF AQNHNGYVAS  240
YIEQGTVNFQ DSCPVYPCTS SEHNNAFQEL QQDQNSEQVN VVQGNNIEEI VPFAQYHNGD  300
VTSYSEEGAT DFQDYNIDCY TGADFSSTLA DLLKDIGTQP QLPIGVNVHA RDHKELGDYT  360
PMELPSGDEV VAAMDATLLT TQQHHSCLLN PFTSSEHNNV FHELQQDQSS EQLINQVQTL  420
DEMVSSDQYH NDDVTSYSEK GATNFQDYNV DCYTGYFFKA TFSSTLAYLL NDIGTQPQLP  480
PICIDESGYD YQLPQKIVTC PMAQRSTDFS SQSELYDLSE NIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	9e-13	NAC family protein