PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37224.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 556aa MW: 62936.4 Da PI: 10.0171

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.4	9.6e-33	25	116	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y ++ed++++++isw+++g++f+v ++ efa+++Lp+ Fkh nf+SFvRQLn+YgF+k+ +++ weF+++ F++g+k+ll++i+ PHT37224.1 25 FLLKTYMLVEDPATDDIISWNSDGSAFIVRQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKIATSR---------WEFSNDLFRRGDKDLLCDIR 112 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rkk PHT37224.1 113 RKKA 116 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MGNLEGDQSE RTLLEYVRKS STPPFLLKTY MLVEDPATDD IISWNSDGSA FIVRQPAEFA 60 RDLLPTLFKH CNFSSFVRQL NTYGFRKIAT SRWEFSNDLF RRGDKDLLCD IRRKKAWTNK 120 QQPNKNNKKE TDNEDQRSSS STSSSSSLEY NSLIDENKRL KKENGALNSE LSSINKKCKE 180 LIDIVSMLAE NSEKEEEEKE GQIKALVGNS HSSRHVKDTV GVSLRIRQHA LQGMGTLYRK 240 GTRSMSDLVV AHVAESVTVQ ELKLFTRLFY RSKMASKSDI VFVFQSESSP FDNVIVEENA 300 SFLKIIHGYN ERFLNISSKE ASSKSTNNNT PQSTNFDVSP FLITNKNANA SEEPEPIWGR 360 KKTANFSVND STESSTRLSY GSVVGFYADE LDPEGTLPGF MDHVPMSLRR WACYPLLLGR 420 IRRNFKHTVL VDVKEMLLLD DPLSRVAKNL THDSVVVNLT KTRSTQKRKA SPSIIMGGSR 480 GIRRLSNAML IEIIRGSSTQ PNKKKKKKMN LVTELTLFNQ LVRNEFILKN VHVIFTELAS 540 REAKDSSVQA KSASLI

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MGNLEGDQSE RTLLEYVRKS STPPFLLKTY MLVEDPATDD IISWNSDGSA FIVRQPAEFA  60
RDLLPTLFKH CNFSSFVRQL NTYGFRKIAT SRWEFSNDLF RRGDKDLLCD IRRKKAWTNK  120
QQPNKNNKKE TDNEDQRSSS STSSSSSLEY NSLIDENKRL KKENGALNSE LSSINKKCKE  180
LIDIVSMLAE NSEKEEEEKE GQIKALVGNS HSSRHVKDTV GVSLRIRQHA LQGMGTLYRK  240
GTRSMSDLVV AHVAESVTVQ ELKLFTRLFY RSKMASKSDI VFVFQSESSP FDNVIVEENA  300
SFLKIIHGYN ERFLNISSKE ASSKSTNNNT PQSTNFDVSP FLITNKNANA SEEPEPIWGR  360
KKTANFSVND STESSTRLSY GSVVGFYADE LDPEGTLPGF MDHVPMSLRR WACYPLLLGR  420
IRRNFKHTVL VDVKEMLLLD DPLSRVAKNL THDSVVVNLT KTRSTQKRKA SPSIIMGGSR  480
GIRRLSNAML IEIIRGSSTQ PNKKKKKKMN LVTELTLFNQ LVRNEFILKN VHVIFTELAS  540
REAKDSSVQA KSASLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	1e-57	HSF family protein