PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT36436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 30056.3 Da PI: 6.2312 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.3 | 5.6e-14 | 6 | 102 | 5 | 97 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvkaeek.ew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkg 97 +rFhPtde l+ +yL k v k+ ++ + i+ d+y +P+++ + ++ e++ ++ yfF++ ++k+ g+r r ++ g Wk+ +k+v++ + PHT36436.1 6 IRFHPTDEKLI-RYLLKFVCCKNYSC-DNIQLEDLYGNkKPREIFEsnSLGDEDTkKVrYFFTQLKNKKLDGTRFIRtVIGGGLWKELDGEKSVYDGPK 102 7**********.99999******999.7899999996549****632333333332336******************8899*************99433 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGLLSIRFHP TDEKLIRYLL KFVCCKNYSC DNIQLEDLYG NKKPREIFES NSLGDEDTKK 60 VRYFFTQLKN KKLDGTRFIR TVIGGGLWKE LDGEKSVYDG PKKTLSCAAL SVRLMYMLVI 120 IRNYVIICLW KDVAAMDAIL PTTQQHGSCL LNQFTSSEHN NAFHELQQDQ NSEQLIKQVQ 180 TIDEIVPSAF HNSCLVYPFT VSDHSAFQLK QDQNIKQVNV VQENNIEETV PFAHYHDDNI 240 TSYPEEGTTN IQTIMLIVIQ H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 1e-09 | NAC family protein |