PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT36353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 27309 Da PI: 8.815 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.5e-15 | 23 | 66 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +g+WT+eEd ll ++++ +G g W++++ + g++R++k+c++rw PHT36353.1 23 KGAWTEEEDFLLRKCIQNYGEGKWHLVPIRAGLNRCRKSCRLRW 66 79****************************************** PP | |||||||
2 | Myb_DNA-binding | 26.6 | 1.4e-08 | 65 | 89 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia +++ gRt++++k++w+++l PHT36353.1 65 RWSLIAGRLP-GRTANDVKNYWNSHL 89 4*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MFDGALKNIM NTAIIANSSG VRKGAWTEEE DFLLRKCIQN YGEGKWHLVP IRAGLNRCRK 60 SCRLRWSLIA GRLPGRTAND VKNYWNSHLQ KKLITAPHRQ ERKYNTALKI TKKSILRPRP 120 RTFSSSAKNN ISWCTNKSTV ITNTLDKDER DKEIGLNICQ KLTSETSSTI DDGVQWWTSL 180 LENCKEIEED VAAVGIFEEK NKLVPSLLHD EINSLTMQQG QSDGWDDFSA DIDLWNLLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G56650.1 | 3e-40 | MYB family protein |