PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36193.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 299aa MW: 33794.1 Da PI: 8.5779

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.1	9e-42	168	245	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ PHT36193.1 168 RCQVEGCSADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKNQQ 245 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MLDYDWGEQS SVMLSGNEPN EENDQNRQFF DPYANTQSFT ENPSSLMNPH QQFPTIQQQN 60 HQFFQTQNNP HLITTSLYDP RAYETCFTHP QGNSIPSVLQ PNSSFMVVPK SEPQFMSAGG 120 IDFGSSSSSR IGLNLGGRTY FSSSEDDFVN RLYRRTRAVE AGSVNTPRCQ VEGCSADLTH 180 AKHYHRRHKV CEFHSKASTV IAAGLTQRFC QQCSRFHLLS EFDNGKRSCR KRLADHNRRR 240 RKNQQTNLEN SSKSQLESTR NSSSDSLARS PPDSGAHSSS VTVAISSPRI SLDCFRQRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	6e-85	SBP family protein