PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36069.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 341aa MW: 39094.4 Da PI: 6.5955

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3e-53	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yLkkkv+++k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PHT36069.1 15 VPPGFRFHPTEEELLQYYLKKKVANEKIDL-DVIQEVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS-N 111 69**************************.9***********964444222455**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g+k+dW+mheyrl PHT36069.1 112 SRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MPDDMSISVN GQSQVPPGFR FHPTEEELLQ YYLKKKVANE KIDLDVIQEV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NSRRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDHINDI HSCTIVCNVV LGESTQEEGW VICRIFKKKN 180 HFKSLETISL TASQSIPHTT ISHRLCHNDE GALEQLFHYM RSSTCKEENN VINNYDTNSH 240 DKFMQLPSLD SPNSSSGDHP KSINCDQGGL NNWIAVDRLV ASHLNGQTIN DYNHDYEHQY 300 NTNNVGGGST NHDYQEESCD LWSFSRVSTN DSLCHVSNGM I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-117	NAC family protein