PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35475.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 758aa MW: 82571.2 Da PI: 7.1354

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.1	2e-24	305	362	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGq + +g ++prsYY+C++++Cpvkk+v + d +v+ei+Y+g Hnh+k PHT35475.1 305 EDGYNWRKYGQNQANGRTYPRSYYKCAYPKCPVKKRVGGYH-DCQVMEIIYKGIHNHPK 362 8************************************99.*************85 PP
2	WRKY	82.8	3.4e-26	515	578	2	59
--SS-EEEEEEE--TT-SS-......EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefp......rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK+vkg+++p rsYY+Cts+gC+v+k++ers d+k v++tY g+H he PHT35475.1 515 DDGYRWRKYGQKVVKGNPNPrllpfaRSYYKCTSSGCNVRKHIERSPYDQKSVITTYDGKHYHE 578 8**************9984444446**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MGDDHVAIFG DWITPSPSPR AFVSSLLVDD VGGWLPRMEH TNESNCRNFN AEPQQNVTAL 60 CSTDGKDGAR AGASTDQTVK SSAPSEQKPS TRGGGLMERM VARSGFHAPR LNTDGLRPPV 120 LSQNQEARSP YLTIPPGLSP SVLLYSPVLI YNPLVCPSPT TGLLPLASGD ESKSLMLTAG 180 IADKRKETAF GSNNSSSFSS NPVNPSSDLS QQLLPQIEVS AHPNNSLQPQ SMEVTQSEQI 240 RHGTSKFPML STEEDFRGSH IKPEVRPFNI VGGSMQHSQT LDEQKDEDTK QRGGGDSKDV 300 NPPAEDGYNW RKYGQNQANG RTYPRSYYKC AYPKCPVKKR VGGYHDCQVM EIIYKGIHNH 360 PKPLSNPISA LGSLNSFGDV QRDNVDPSGT GFNSELALAT SQQGPTAKGL MWSNNKLEAT 420 SLAALHSEYC SGSTTLQSKG AQQGSADAVE VSSVFSNDED DHGTRGSVLL GYDGAEDEFE 480 PKRRKSTVSG TSGTIRAIRE PRVVVHTISE VDIIDDGYRW RKYGQKVVKG NPNPRLLPFA 540 RSYYKCTSSG CNVRKHIERS PYDQKSVITT YDGKHYHEVP PARTSSQGSS GASKSPSNPI 600 TTDAQSHVGR PEPTQVQNTK PAQVQNTKST QVQNTNERYG RAPQVQNTNE RYGRAPQVQN 660 TNERYGRAPS LGSAGPISGF DSFGTNEQQD LPSLAMAGFN FNQHQFSVPL NPYIGWQRPV 720 NDADFVLPEG EAMPDPNLNY SNGSSTYQQI MNGLPPQM

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MGDDHVAIFG DWITPSPSPR AFVSSLLVDD VGGWLPRMEH TNESNCRNFN AEPQQNVTAL  60
CSTDGKDGAR AGASTDQTVK SSAPSEQKPS TRGGGLMERM VARSGFHAPR LNTDGLRPPV  120
LSQNQEARSP YLTIPPGLSP SVLLYSPVLI YNPLVCPSPT TGLLPLASGD ESKSLMLTAG  180
IADKRKETAF GSNNSSSFSS NPVNPSSDLS QQLLPQIEVS AHPNNSLQPQ SMEVTQSEQI  240
RHGTSKFPML STEEDFRGSH IKPEVRPFNI VGGSMQHSQT LDEQKDEDTK QRGGGDSKDV  300
NPPAEDGYNW RKYGQNQANG RTYPRSYYKC AYPKCPVKKR VGGYHDCQVM EIIYKGIHNH  360
PKPLSNPISA LGSLNSFGDV QRDNVDPSGT GFNSELALAT SQQGPTAKGL MWSNNKLEAT  420
SLAALHSEYC SGSTTLQSKG AQQGSADAVE VSSVFSNDED DHGTRGSVLL GYDGAEDEFE  480
PKRRKSTVSG TSGTIRAIRE PRVVVHTISE VDIIDDGYRW RKYGQKVVKG NPNPRLLPFA  540
RSYYKCTSSG CNVRKHIERS PYDQKSVITT YDGKHYHEVP PARTSSQGSS GASKSPSNPI  600
TTDAQSHVGR PEPTQVQNTK PAQVQNTKST QVQNTNERYG RAPQVQNTNE RYGRAPQVQN  660
TNERYGRAPS LGSAGPISGF DSFGTNEQQD LPSLAMAGFN FNQHQFSVPL NPYIGWQRPV  720
NDADFVLPEG EAMPDPNLNY SNGSSTYQQI MNGLPPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	4e-87	WRKY family protein