PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35151.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 841aa    MW: 92043 Da    PI: 6.1506
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-182583357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PHT35151.1 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                56789****************************************************97 PP
2START1532.6e-481643712204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv ++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W ++++ +e+    s g  g+++  +++ 
  PHT35151.1 164 IAEETLAEFLSKATGTAVDWVPMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRNVEVFTMFSAGngGTIEILYTQI 261
                 7899******************************************************.7777777777****************9999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+++Ry+ +l  g++v++++S++ +   p+    s++vRa++lpSg+li+p+++g+s +++v+h +l++++ +++lr+l++s+ + ++
  PHT35151.1 262 YAPTTLAPaRDFWTLRYTTTLDTGSLVVCERSLSGTGAGPNaaaASQFVRAQMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSAPEILRPLYESSKVVAQ 360
                 **************************************9999999****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++ a+l++ +
  PHT35151.1 361 KMTIAALRYAR 371
                 *******9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    
MAMVAQQHRE SSSGSITKHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKESSRL QTVNRKLSAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLQ NASAATTDVS CESVVTTPQH SLRDASNPAG LLSIAEETLA EFLSKATGTA  180
VDWVPMPGMK PGPDSVGIFA ISHSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRNV  240
EVFTMFSAGN GGTIEILYTQ IYAPTTLAPA RDFWTLRYTT TLDTGSLVVC ERSLSGTGAG  300
PNAAAASQFV RAQMLPSGYL IRPCDGGGSI IHIVDHLNLE AWSAPEILRP LYESSKVVAQ  360
KMTIAALRYA RQLAQETSGE VVYGLGRQPA VLRTFSQRLC RGFNDAINGF SDDGWSMLSS  420
DGAEDVIVAV NSRKNLATTS VPLSPPGGIL CAKASMLLQN VPPAVLVRFL REHRSEWADF  480
NVDAYVASSL KSCPYSYPGM RPTRFTGSQI IMPLGHTIEH EEMLEVIRLE GHSIGQEDAF  540
MPRDIHLLQM CSGTDENAVG ACSELVFAPI DEMFPDDAPL LPSGFRIIPL ESKSSDSHDT  600
LNAHRTLDLA SSLEVGAATN PATGDAASCY SARSVLTIAF QFPFEDNLQE NVATMARQYV  660
RSVVSSVQRV AMAISPSGVN PTLGSKLSPA SPEAVTLSHW ICQSYSYHMG TELLRADSSG  720
DESVLKNLWQ HQDAILCCSL KSLPVLIFAN KAGLDMLETT LVALQDISLD KIFDESGKKV  780
LFAEFPKIME QGFACLPGGI CMSAMGRHIS YEQAIAWKVF ASSEENAVHC LAFSFINWSF  840
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein