PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34969.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 415aa MW: 46638.6 Da PI: 8.7875

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	6.9e-50	47	173	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF Ptdeel+++yLkkkveg++ + evi+ev+i k+ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ PHT34969.1 47 MFPGFRFCPTDEELISYYLKKKVEGSDKCV-EVISEVEIWKHEPWDLPaKSVVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSN 143 579**********************777.99***********767778899***********************************.99 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvf+ grapkg++t+W+mhey + PHT34969.1 144 MIGTKRTLVFHIGRAPKGQRTQWIMHEYCM 173 ****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MEDGDLLGST SEKKDGEIVK VNNNNSGSNN DGGEKNVGIT VATASSMFPG FRFCPTDEEL 60 ISYYLKKKVE GSDKCVEVIS EVEIWKHEPW DLPAKSVVQS DNEWFFFSPR GRKYPNGSQS 120 KRATESGYWK ATGKERNVKS GSNMIGTKRT LVFHIGRAPK GQRTQWIMHE YCMTGNSYYQ 180 DSMVVCRLRK NNELPLNDTP GNQRNHLAAT NVTTALFEAG QLDGLGLING GECCSKEGSS 240 SYSSRSVEQI ESGSESDKLN KELPQHHSSS YWKDRDEEDC FADIMKDDII KLDDSSDRAR 300 HNLLPTIIRK IEPSTKPTTS QEAQNLMPQS HRLPFQGTAN RRLKLQTEKP PRRVKRSEPH 360 EAIKKNSHAQ GISRQLINII PVTRTIPLLL VSLMLLIVYL SLFGVPKQVK SHYSS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MEDGDLLGST SEKKDGEIVK VNNNNSGSNN DGGEKNVGIT VATASSMFPG FRFCPTDEEL  60
ISYYLKKKVE GSDKCVEVIS EVEIWKHEPW DLPAKSVVQS DNEWFFFSPR GRKYPNGSQS  120
KRATESGYWK ATGKERNVKS GSNMIGTKRT LVFHIGRAPK GQRTQWIMHE YCMTGNSYYQ  180
DSMVVCRLRK NNELPLNDTP GNQRNHLAAT NVTTALFEAG QLDGLGLING GECCSKEGSS  240
SYSSRSVEQI ESGSESDKLN KELPQHHSSS YWKDRDEEDC FADIMKDDII KLDDSSDRAR  300
HNLLPTIIRK IEPSTKPTTS QEAQNLMPQS HRLPFQGTAN RRLKLQTEKP PRRVKRSEPH  360
EAIKKNSHAQ GISRQLINII PVTRTIPLLL VSLMLLIVYL SLFGVPKQVK SHYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	2e-77	NAC family protein