PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT34084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 268aa MW: 30172.4 Da PI: 7.2349 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 124 | 146 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H PHT34084.1 124 FECQYCFKQFANSQALGGHQNAH 146 89******************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 268 aa Download sequence |
MAKDVVSSTF QSLSSNINGE NDHEPSSKSC VENNKRLKIF GFELGQSDAL KLPLCTGSRE 60 EPDHKLGFEL IDPKKSPKEI QDISSKEDQE SVNSSSASTI SSGNIRDHQE KILASSNEEL 120 LKKFECQYCF KQFANSQALG GHQNAHKKER MRKKRLQLQA RKASFSCYLQ PFHHQNYNNN 180 NNIINYQVYD PQFTVYEESQ ISFSPSDNQD YQVSSTGGKW PFHQESNCTF TLTHGGNYMK 240 PPSTSLANSA TEQKSSCKPL DLQLGLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10480.1 | 4e-14 | C2H2 family protein |