PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33888.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 285aa    MW: 31619 Da    PI: 7.8239
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1062.3e-3359117360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreveee 60 
                  +v+YkeClkNhAas+GghavDGCgEf++s++++ +++ +l CaACgCHRnFHRre++e+
   PHT33888.1  59 AVTYKECLKNHAASIGGHAVDGCGEFIASPESTqSNPISLSCAACGCHRNFHRREPSEN 117
                  799**************************999889********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDLTCTNNPT PTPSHTPTKT PDSEIDTPPL IKPLSFTNFT FKNHHHNHQP PCAPPSSTAV  60
TYKECLKNHA ASIGGHAVDG CGEFIASPES TQSNPISLSC AACGCHRNFH RREPSENQDF  120
ISFRHHILPP IHHFSPSSSP SSSPSPPPPP PLPQPQPQPI KAEKPCGRKR FRTKFTQEQK  180
EKMHLFSEKL GWKLQKVDEV AVDEFCREVG VGKGVLRVWM HNNKNTFGKK EHSFENKNGF  240
NMNGGTSSNE DNHRHNDNNN DNNDNSTSNC ELHLHISTNG SSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.16e-52ZF-HD family protein