PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT33866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28983.5 Da PI: 9.305 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.4 | 2.9e-53 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL+ +++++++++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s ++ PHT33866.1 9 LPPGFRFHPTDEELIMYYLRYQATSRPCPV-SIIPEIDVYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS-ASKY 105 79****************************.89***************99999*****************************************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykg+ pkg+ktdW+mheyrl PHT33866.1 106 VGVKKALVFYKGKPPKGVKTDWIMHEYRL 134 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVGKISSDLP PGFRFHPTDE ELIMYYLRYQ ATSRPCPVSI IPEIDVYKFD PWELPEKAEF 60 GENEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SASKYVGVKK ALVFYKGKPP 120 KGVKTDWIMH EYRLSESKSQ TTKHSGSMRL DDWVLCRIYK KKNLGKTMEM MKVEGEEDVV 180 ESHHQIDATG SLELVFLNLW YKTPFRKCVS TLNVLDLLRI LKLLRLTGNT EVTEKTELLK 240 LLRFPESHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-100 | NAC family protein |