PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33692.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 369aa    MW: 40927.7 Da    PI: 5.4564
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.2e-17260293134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+k+LCnaCG++y+k +
  PHT33692.1 260 CLHCEITKTPQWRAGPMGPKSLCNACGVRYKKGR 293
                 99******************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MGSNFGDEID CSSFFDHMED LIEFSPENEC GDLDAVDCKD FPSWNDECAG LDAVGCKDFQ  60
NIWNDPLPDT DPLFSSSYSN SASDFSAELS VPYEDIAQLE WLSTFVEDSF SCEGLTLGKE  120
HCRVDKEPSD SKFLTSSPVS VLESSSSSSS SSSSSSSSGP GKTIPPLSPC HRGPQRARSK  180
RPRPTTFNPR PVNQLMFPTS LLPQQFVVPP GVHSLESESF AEESSPMKKK KKRIKFSIPR  240
PPIETLHDDH NPEPQEVRKC LHCEITKTPQ WRAGPMGPKS LCNACGVRYK KGRLYPEYRP  300
AASPTFVPSL HSNSHKKVME MRTSVFPDDT QYYYKPPKPS RARPLTIGQA ENTTTTASTL  360
TAQLDVKPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180184KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-37GATA family protein